Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015880178.1_cds_XP_016437414.1_33177
CDS Infomation

[gene=LOC107763440] [db_xref=GeneID:107763440] [protein=aspartyl protease family protein At5g10770-like] [protein_id=XP_016437414.1] [location=complement(join(19808..21123,26556..26748))] [gbkey=CDS]
Sequence

ATGGAACATTCACTAATGGCCACTCGAAGTTACTTTTTGCTCTTCTCTTCTTTTACTTTT
CTTCTCATTTTGCTTTCATTCCCTGTGGAGAAAAGCCATGCTTTGGAAGCAAAAGAAACC
ATTGAATCCCATTTTCACACTCTCCAACTCACCTCTCTGCTTCCTTCCTCTTCTTGCAAC
ACTGCAACCAAAGGTAAAAGAAGAGGGGCATCATTGGAGGTCGTCAACAGGCAAGGCCCA
TGTACCCAACTCAACCAAAAGGGAGCAAAAGCCCCAACTTTGACCGAAATCTTAGCCCAC
GATCAAGCCCGAGTGGACTCAATACAAGCCCGCGTCACAGACCAAAGCTACGACCTCTTC
AAGAAAAAAGACAAAAAATCTTCCAACAAAAAGAAGAGCGTAAAAGACTCAAAAGCCAAC
CTCCCTGCACAATCCGGCCTTCCTCTCGGCACCGGAAACTACATTGTCAACGTCGGACTT
GGAACCCCCAAAAAAGACCTTTCACTCATTTTCGACACCGGCAGTGATCTAACATGGACT
CAATGCCAACCTTGTGTCAAATCTTGCTACGCTCAACAACAACCAATTTTCGACCCATCA
GCTTCAAAAACATATTCCAACATTTCGTGCACTTCCACTGCTTGTTCTGGTCTCAAATCA
GCTACTGGAAATAGCCCAGGTTGTTCTTCATCGAATTGCGTGTACGGTATTCAGTACGGT
GATTCCTCATTCACAGTGGGGTTTTTCGCCAAGGATACATTAACCTTAACACAAAATGAT
GTTTTCGATGGGTTCATGTTCGGTTGTGGGCAAAACAACAGGGGATTGTTCGGAAAAACT
GCTGGATTAATCGGTTTAGGTCGCGATCCATTGTCCATTGTTCAACAAACAGCTCAGAAA
TTCGGAAAATACTTCTCTTACTGCCTTCCCACTTCCCGAGGGTCAAATGGTCATTTAACA
TTCGGCAACGGTAACGGAGTAAAAACTTCAAAAGCAGTAAAAAACGGCATCACGTTCACG
CCGTTTGCTTCGTCACAGGGGGCGACATTTTACTTCATTGACGTACTAGGTATTTCCGTC
GGTGGAAAAGCTTTATCGATCAGTCCGATGTTGTTCCAGAACGCCGGAACGATTATAGAT
TCCGGTACGGTGATTACACGGTTGCCGTCGACGGCGTACGGCAGTTTGAAGTCAACTTTC
AAGCAGTTCATGTCGAAATACCCAACGGCGCCGGCACTTTCTTTGCTGGACACTTGCTAT
GATTTAAGCAATTACACTTCAATTAGTATTCCGAAGATCAGCTTCAACTTCAACGGCAAT
GCGAATGTGGATTTGGAGCCGAATGGTATTCTTATAACAAACGGTGCATCTCAGGTTTGT
TTGGCTTTTGCTGGAAATGGAGATGATGATACTATTGGTATTTTTGGGAATATACAACAA
CAGACATTGGAGGTAGTATACGATGTTGCTGGTGGGCAATTAGGGTTTGGTTATAAGGGA
TGTTCTTAA

Peptide Sequence

PEP ID

XP_016437414.1
PEP Infomation

PREDICTED: aspartyl protease family protein At5g10770-like [Nicotiana tabacum]
Sequence

MEHSLMATRSYFLLFSSFTFLLILLSFPVEKSHALEAKETIESHFHTLQLTSLLPSSSCN
TATKGKRRGASLEVVNRQGPCTQLNQKGAKAPTLTEILAHDQARVDSIQARVTDQSYDLF
KKKDKKSSNKKKSVKDSKANLPAQSGLPLGTGNYIVNVGLGTPKKDLSLIFDTGSDLTWT
QCQPCVKSCYAQQQPIFDPSASKTYSNISCTSTACSGLKSATGNSPGCSSSNCVYGIQYG
DSSFTVGFFAKDTLTLTQNDVFDGFMFGCGQNNRGLFGKTAGLIGLGRDPLSIVQQTAQK
FGKYFSYCLPTSRGSNGHLTFGNGNGVKTSKAVKNGITFTPFASSQGATFYFIDVLGISV
GGKALSISPMLFQNAGTIIDSGTVITRLPSTAYGSLKSTFKQFMSKYPTAPALSLLDTCY
DLSNYTSISIPKISFNFNGNANVDLEPNGILITNGASQVCLAFAGNGDDDTIGIFGNIQQ
QTLEVVYDVAGGQLGFGYKGCS

Transcript Sequence

Gene sequence data has not been registered.